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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411
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        About MultiQC

        This report was generated using MultiQC, version 1.27

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/MultiQC/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2026-02-20, 15:07 KST based on data in: /home/yyyyx/Work/OC43_Bulk_MRC5_v2/feature_counts_individual

        General Statistics

        Showing 34/34 rows and 1/2 columns.
        Sample NameAssignedAssigned
        01_uninfected_rep1
        83.6M
        85.6%
        02_OC43_3hpi_rep1
        85.5M
        82.7%
        03_OC43_6hpi_rep1
        71.1M
        84.1%
        04_OC43_9hpi_rep1
        65.6M
        85.3%
        05_OC43_12hpi_rep1
        75.8M
        86.5%
        06_OC43_18hpi_rep1
        73.5M
        90.7%
        07_OC43_24hpi_rep1
        70.1M
        92.0%
        08_OC43_30hpi_rep1
        82.2M
        92.2%
        09_uninfected_rep2
        68.5M
        84.4%
        10_OC43_1.5hpi_rep2
        77.8M
        84.1%
        11_OC43_3hpi_rep2
        80.2M
        83.3%
        12_OC43_9hpi_rep2
        75.9M
        84.3%
        13_OC43_12hpi_rep2
        70.4M
        87.9%
        14_OC43_18hpi_rep2
        75.7M
        90.4%
        15_OC43_24hpi_rep2
        26.5M
        36.0%
        16_OC43_30hpi_rep2
        72.7M
        91.2%
        17_uninfected_rep3
        53.6M
        78.4%
        18_OC43_1.5hpi_rep3
        56.3M
        77.0%
        19_OC43_3hpi_rep3
        47.5M
        76.6%
        20_OC43_6hpi_rep3
        57.2M
        75.7%
        21_OC43_9hpi_rep3
        57.3M
        81.4%
        22_OC43_12hpi_rep3
        44.7M
        85.0%
        23_OC43_18hpi_rep3
        47.8M
        86.6%
        24_OC43_24hpi_rep3
        57.8M
        87.5%
        25_OC43_30hpi_rep3
        73.4M
        88.3%
        29_uninfected_rep4
        56.7M
        77.1%
        30_OC43_1.5hpi_rep4
        57.2M
        77.7%
        31_OC43_3hpi_rep4
        46.4M
        78.7%
        32_OC43_6hpi_rep4
        62.6M
        78.9%
        33_OC43_9hpi_rep4
        54.5M
        81.0%
        34_OC43_12hpi_rep4
        61.7M
        85.8%
        35_OC43_18hpi_rep4
        89.2M
        88.8%
        36_OC43_24hpi_rep4
        52.2M
        90.0%
        37_OC43_30hpi_rep4
        85.7M
        89.2%

        featureCounts

        Counts mapped reads for genomic features such as genes, exons, promoter, gene bodies, genomic bins and chromosomal locations.URL: http://subread.sourceforge.netDOI: 10.1093/bioinformatics/btt656

        Assignments

        Created with MultiQC

        MultiQC v1.27 - Written by Phil Ewels, available on GitHub.

        This report uses Plotly, jQuery, jQuery UI, Bootstrap and FileSaver.js.